FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005404760

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005404760
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9807458
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCTTAG36700.021.9269561
GTACTAG20200.019.3804471
GTACTAA29700.019.0396791
GGTCTAG31400.018.7015151
GTCCTAG39350.018.6079311
CTATACT36750.018.3476414
CGTCTTA22150.018.329992145
GTATTAG34450.018.3084451
CACGAGC140750.017.977322145
GTTCTAG45650.017.4692131
GTCCTAA33800.017.3735981
GTACAGG70500.017.2759361
CTAGACT34400.017.0718774
GTGCTAG40950.016.995691
GTACATA43700.016.9215531
TCTATAC36350.016.7542553
CGTCTTG39150.016.667051145
GCCTATG118700.015.941815145
GACCGGC66500.015.917659145
GTATTAA51550.015.6104611
Produced by FastQC (version 0.11.5)