Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005404833 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 11412958 |
Sequences flagged as poor quality | 0 |
Sequence length | 79 |
%GC | 43 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTACTAG | 2000 | 0.0 | 18.06955 | 1 |
CGAGACT | 4805 | 0.0 | 16.253979 | 4 |
GCGAGAC | 4775 | 0.0 | 16.203167 | 3 |
GTCCTAG | 2905 | 0.0 | 16.084438 | 1 |
GAGCGAG | 5420 | 0.0 | 13.874266 | 1 |
AGCGAGA | 5665 | 0.0 | 13.271848 | 2 |
GTATTAG | 3850 | 0.0 | 13.179417 | 1 |
GCTCTAG | 3085 | 0.0 | 13.016063 | 1 |
GTTCTAG | 3935 | 0.0 | 12.523656 | 1 |
GTGCTAG | 3495 | 0.0 | 12.429163 | 1 |
GTCTTAG | 3070 | 0.0 | 12.366222 | 1 |
GTACTAA | 3195 | 0.0 | 12.110918 | 1 |
GGTCTAG | 2280 | 0.0 | 12.00794 | 1 |
GTACTAC | 1770 | 0.0 | 11.961808 | 1 |
GCCCTAG | 2670 | 0.0 | 11.484448 | 1 |
GTCCAGG | 7475 | 0.0 | 11.476217 | 1 |
GTGCTGG | 17765 | 0.0 | 11.424881 | 1 |
GTACAGG | 4140 | 0.0 | 11.2863035 | 1 |
GGTCTAA | 2690 | 0.0 | 11.263358 | 1 |
CTAGACT | 3185 | 0.0 | 11.229383 | 4 |