Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005404836 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 11009632 |
Sequences flagged as poor quality | 0 |
Sequence length | 79 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GCGAGAC | 5220 | 0.0 | 15.452969 | 3 |
GTACTAG | 1985 | 0.0 | 15.084088 | 1 |
CGAGACT | 5180 | 0.0 | 14.726675 | 4 |
GGTCTAG | 2340 | 0.0 | 14.512184 | 1 |
GTGCTAG | 3520 | 0.0 | 14.107886 | 1 |
GTCCTAG | 3075 | 0.0 | 13.8933325 | 1 |
GTCTTAG | 3320 | 0.0 | 13.637958 | 1 |
GAGCGAG | 5600 | 0.0 | 13.562539 | 1 |
GCTAGAC | 2300 | 0.0 | 13.489046 | 3 |
GTATTAG | 3415 | 0.0 | 13.472418 | 1 |
AGCGAGA | 5975 | 0.0 | 12.64511 | 2 |
GTCCTAA | 2955 | 0.0 | 12.4804325 | 1 |
GTGTTAG | 4380 | 0.0 | 12.17151 | 1 |
GTTCTAG | 4050 | 0.0 | 12.08135 | 1 |
GTCTAGC | 2325 | 0.0 | 11.935932 | 1 |
CTAGACG | 490 | 1.9408617E-9 | 11.918239 | 4 |
CGAGACG | 1380 | 0.0 | 11.901829 | 73 |
GTGCAGG | 7580 | 0.0 | 11.850362 | 1 |
GTCTAAG | 2650 | 0.0 | 11.849998 | 1 |
CTAGACT | 3245 | 0.0 | 11.81035 | 4 |