FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005404873

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005404873
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10768942
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGCGTT9550.031.105238145
CCGTATA14050.024.236763145
GTACTAG23000.023.3528581
GTACTAA34250.022.0398641
GTCCTAG44850.021.3622841
GACGATA23050.018.230986145
GTATAGG29500.018.2073141
GTCTTAG42050.017.9516141
GTATTAG39250.017.9377611
GTTCTAA55500.017.6553761
GTTCTAG52100.017.4143981
CTATACG7550.017.2763984
GCTCTAG55150.017.240981
GTGCTAG43150.017.157561
GTCCTAA42000.017.10891
GTATTAA60300.016.8518221
TCTATAC40600.016.6058883
CGACGAA23200.016.551636145
GCCGTAA15900.016.404327145
GTTCTAT50500.016.385121
Produced by FastQC (version 0.11.5)