FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005404878

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005404878
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7787906
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTACTAG15800.022.9469411
TACGCGA3457.507879E-821.0179352
GTCCTAG30350.020.7860761
GTCTTAG27200.018.9278551
GTACTAA23250.018.400981
GGTCTAA23850.018.2420981
GTACATA30450.018.0983161
GTATATA42200.018.042171
GGTCTAG24650.017.9442311
CTAGACT25500.017.9146984
GTATAGG19850.017.899771
GTATTAG25700.017.4932481
GTATTAA38650.017.4479891
GTTCTAG34300.016.9124981
GTACAAG44450.016.476371
GTACAGA58600.016.4575791
GCTCTAG37950.016.4323081
GGATTAG27000.016.1138531
TACTAGG21200.016.0757472
GTACTAT24050.015.9798511
Produced by FastQC (version 0.11.5)