FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005404883

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005404883
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7573873
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCGTATA17200.026.554316145
CGCCGTT15150.022.01244145
GTTCTAG35100.021.914381
GTCCTAG32500.021.2114641
GTACTAG14050.021.1757091
GCCCTAG30400.019.8123021
GTTCTAA36200.019.0434421
CTATACT28000.018.9001334
GTATAGG21900.018.8869191
GTATTAA36900.018.4855291
GTCCTAT25200.018.4293421
GTCCTAA26150.018.314821
GTATTAG25900.017.9312521
GTGCTAG26850.017.837341
GTACATA32400.017.6934491
GTCTTAG28800.017.6374571
GTACAGA57500.017.541931
GTACTAA22850.017.1489661
GTCTTAA34350.017.1115231
GTATAAG26100.016.6817321
Produced by FastQC (version 0.11.5)