FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005404884

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005404884
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7521614
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTACTAA24700.022.0153391
GTCCTAG30750.021.6922071
GTGCTAG29200.019.1191651
GTATAGG20100.018.0357861
GTACAGG53550.018.0074921
GTATATA41050.017.838951
CTAGACT24050.017.787164
GTATTAA39750.017.5103631
GTCTTAG30650.017.5050091
GTTCTAA35250.017.4831981
TAAGCGA9700.017.1919775
GTATTAG25450.016.808361
GTACTAG16000.016.7665161
GTACAGA53200.016.7631071
CGTCTTG38500.016.760406145
GTCCTAA26850.016.7420431
GTTCTAG33950.016.4441721
TATACCG5302.2722816E-816.4162925
GTCCTAT26950.016.4108891
GTACATA32800.016.1365281
Produced by FastQC (version 0.11.5)