Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005405024 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 11542684 |
Sequences flagged as poor quality | 0 |
Sequence length | 79 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTACTAG | 1870 | 0.0 | 16.400167 | 1 |
GTATTAG | 3475 | 0.0 | 15.234345 | 1 |
GTTCTAG | 4115 | 0.0 | 14.728171 | 1 |
GTCCTAG | 3035 | 0.0 | 14.435544 | 1 |
GTCTTAG | 3485 | 0.0 | 13.7239485 | 1 |
GTACTAA | 2870 | 0.0 | 13.484491 | 1 |
GCGAGAC | 4740 | 0.0 | 13.170094 | 3 |
GTGCTAG | 3670 | 0.0 | 13.032144 | 1 |
CGAGACT | 4980 | 0.0 | 12.975228 | 4 |
GCTCTAG | 3450 | 0.0 | 12.910747 | 1 |
CGAGACG | 1395 | 0.0 | 12.558953 | 73 |
GTACGAG | 805 | 0.0 | 12.245557 | 1 |
GTACTAT | 2930 | 0.0 | 12.086895 | 1 |
GTCCAGG | 8485 | 0.0 | 12.048051 | 1 |
GTATAGG | 2220 | 0.0 | 11.676589 | 1 |
GAGCGAG | 5410 | 0.0 | 11.67507 | 1 |
GTACAGG | 4085 | 0.0 | 11.618816 | 1 |
GTCTAGG | 3070 | 0.0 | 11.5357 | 1 |
CCAGGAC | 8705 | 0.0 | 11.532806 | 3 |
GTCCTAA | 3220 | 0.0 | 11.451863 | 1 |