Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005405031 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 10521153 |
Sequences flagged as poor quality | 0 |
Sequence length | 79 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTACTAG | 1910 | 0.0 | 15.670251 | 1 |
GTATTAG | 3335 | 0.0 | 15.650768 | 1 |
GCGAGAC | 4440 | 0.0 | 14.548343 | 3 |
CGAGACT | 4460 | 0.0 | 14.237898 | 4 |
GTTCTAG | 3775 | 0.0 | 14.116641 | 1 |
GTCCTAG | 3130 | 0.0 | 14.110309 | 1 |
GTCCTAA | 2745 | 0.0 | 14.094804 | 1 |
GTGCTAG | 3255 | 0.0 | 13.79271 | 1 |
GTCTTAG | 3030 | 0.0 | 13.612293 | 1 |
GCCCTAG | 2650 | 0.0 | 12.947248 | 1 |
GAGCGAG | 4935 | 0.0 | 12.869379 | 1 |
GTATAAG | 2845 | 0.0 | 12.444715 | 1 |
GTACTAA | 2935 | 0.0 | 12.436192 | 1 |
AGCGAGA | 5020 | 0.0 | 12.431569 | 2 |
GGTCTAG | 2170 | 0.0 | 12.278876 | 1 |
GCTAGAC | 2410 | 0.0 | 12.114241 | 3 |
GTCCAGG | 7680 | 0.0 | 11.976635 | 1 |
CTAGACC | 2165 | 0.0 | 11.968286 | 4 |
GTACGGG | 590 | 2.1827873E-11 | 11.754308 | 1 |
GTGCTGG | 16910 | 0.0 | 11.440045 | 1 |