Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005405035 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 10253024 |
Sequences flagged as poor quality | 0 |
Sequence length | 79 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTACTAG | 1705 | 0.0 | 16.482494 | 1 |
GTCCTAG | 3100 | 0.0 | 15.658371 | 1 |
GCGAGAC | 4200 | 0.0 | 15.206026 | 3 |
GTGCTAG | 3060 | 0.0 | 15.028158 | 1 |
CGAGACT | 4050 | 0.0 | 14.417213 | 4 |
GTATTAG | 3235 | 0.0 | 13.989559 | 1 |
GTCTTAG | 2915 | 0.0 | 13.897639 | 1 |
GAGCGAG | 4625 | 0.0 | 13.494008 | 1 |
GGTCTAG | 2110 | 0.0 | 13.145823 | 1 |
GTTCTAG | 3690 | 0.0 | 13.055821 | 1 |
GTGCAGG | 6850 | 0.0 | 13.000375 | 1 |
GCTCTAG | 2890 | 0.0 | 12.754991 | 1 |
GCTAGAC | 2375 | 0.0 | 12.292871 | 3 |
AGCGAGA | 4880 | 0.0 | 12.2648325 | 2 |
CTAGGGT | 2470 | 0.0 | 12.263022 | 4 |
GTCCTAA | 2650 | 0.0 | 12.119744 | 1 |
GTACAGG | 3950 | 0.0 | 12.1040535 | 1 |
GTCTAGG | 2735 | 0.0 | 11.609634 | 1 |
GTACTAA | 2950 | 0.0 | 11.50582 | 1 |
GTCCAGG | 7650 | 0.0 | 11.402316 | 1 |