FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005405152

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005405152
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11016928
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTACTAG23500.021.906421
GTATTAG36550.020.2345581
GTATTAA56850.018.8760951
CGTCTTA25150.018.738405145
CTATACT40400.018.6625844
CGTCTTG47800.018.656685145
GTGCTAG43500.018.0017781
GTCCTAG48100.017.9383621
GTTCTAG52500.017.8160461
GGTCTAG35150.017.5337371
GTACTAT35750.017.4422841
TCTAGAC42450.017.2490623
GTACTAA34800.017.0850221
GTGCTAA47250.016.8799741
GTATATG56750.016.6095711
GTATAGA41700.016.518421
CCCCTAG45450.016.4317671
GTATATA65400.016.408351
CTACACT54250.016.169834
GTCCTAA39600.016.1127031
Produced by FastQC (version 0.11.5)