FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005405153

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005405153
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11016928
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCGTATA16450.026.427984145
GTCCTAG41750.022.7757571
GTACTAA33950.020.7391031
GTCTTAG41950.020.0716931
GTATTAG38400.020.0369991
GTGCTAG43250.019.9718761
CGCCGTT17150.019.856945145
GTATTAA60250.018.6737981
GTCCTAA42650.018.0403441
GTACTAG20450.017.7473981
GTTCTAG50100.017.241191
GTTCTAA58150.016.8516351
CTGCCGC170450.016.536032145
GGTCTAA36450.016.3295561
GTATAGG29650.016.1576161
GTATATG52900.015.7797531
GTACAGG80650.015.5703991
GTATATA71000.015.5397221
GTACACG23950.015.456911
GTGTTAG49000.015.406191
Produced by FastQC (version 0.11.5)