FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005405156

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005405156
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10743652
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCCTAG47300.021.3106421
GTACTAG21000.020.0286461
GTGCTAG44600.019.348841
GTATTAG36550.019.0470071
CGTCTTG53850.018.848467145
GTTCTAG50450.018.255151
GTATTAA57400.017.8135341
GTACTAA33450.017.7770881
GCCCTAG43650.016.6134031
GTATATA60700.016.606151
CGTCTTA34500.016.391144145
GGGGGGG4188600.016.254614145
GTACAGG77750.016.042461
CTATACT38950.016.0076944
TCTGTAC78100.015.9667013
TCTATAC36800.015.9578713
GGTCTAG36450.015.9160511
GGTCTAA33800.015.8766161
GCTCTAG51350.015.8168671
GTACTAT34500.015.7646761
Produced by FastQC (version 0.11.5)