Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005405195 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 10613876 |
Sequences flagged as poor quality | 0 |
Sequence length | 35-76 |
%GC | 47 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTCCTAG | 2650 | 0.0 | 15.980657 | 1 |
GTATTAG | 2075 | 0.0 | 15.597145 | 1 |
TAGTGCG | 415 | 1.8189894E-12 | 15.249008 | 57 |
GTTCTAG | 3110 | 0.0 | 14.945441 | 1 |
GTTCTAA | 3425 | 0.0 | 14.877726 | 1 |
GTCCTAA | 2280 | 0.0 | 14.647796 | 1 |
GTCTTAG | 2445 | 0.0 | 14.645016 | 1 |
GTACTAG | 1295 | 0.0 | 14.6227255 | 1 |
GTGCTAG | 2560 | 0.0 | 13.58366 | 1 |
GTATAAG | 1985 | 0.0 | 13.529118 | 1 |
GTATATA | 4115 | 0.0 | 13.052393 | 1 |
GTATATG | 3360 | 0.0 | 13.013672 | 1 |
TATACTG | 2940 | 0.0 | 12.8713045 | 5 |
GGTCTAA | 2095 | 0.0 | 12.818758 | 1 |
GGTCTAG | 2205 | 0.0 | 12.491563 | 1 |
CTATACT | 2425 | 0.0 | 12.484191 | 4 |
GTATTAT | 3250 | 0.0 | 12.394753 | 1 |
TAGTCGG | 640 | 0.0 | 12.36385 | 9 |
GTACTAA | 2045 | 0.0 | 12.290369 | 1 |
GCCCTAG | 2470 | 0.0 | 12.12712 | 1 |