Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005405327 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 11686962 |
Sequences flagged as poor quality | 0 |
Sequence length | 35-76 |
%GC | 49 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTATTAG | 2445 | 0.0 | 17.887257 | 1 |
GTCCTAG | 3060 | 0.0 | 16.54302 | 1 |
GTCTTAG | 2580 | 0.0 | 15.616549 | 1 |
GTGCTAG | 2745 | 0.0 | 15.305107 | 1 |
GTTCTAG | 3315 | 0.0 | 15.062718 | 1 |
GTTCTAA | 3220 | 0.0 | 14.544605 | 1 |
GTACTAA | 1910 | 0.0 | 14.423661 | 1 |
GTATATG | 3320 | 0.0 | 13.691618 | 1 |
GTCCTAT | 2555 | 0.0 | 13.612859 | 1 |
GTACTAT | 2035 | 0.0 | 13.199245 | 1 |
GTATTAA | 3140 | 0.0 | 13.160442 | 1 |
GTCCTAA | 2410 | 0.0 | 13.145882 | 1 |
GCTCTAG | 3550 | 0.0 | 12.998563 | 1 |
GTACTAG | 1475 | 0.0 | 12.840726 | 1 |
GGTCTAG | 2440 | 0.0 | 12.701984 | 1 |
GTATAGA | 2405 | 0.0 | 12.600463 | 1 |
TATACTG | 3350 | 0.0 | 12.414357 | 5 |
CCTCTAG | 4830 | 0.0 | 12.334395 | 1 |
GGTCTAA | 2185 | 0.0 | 12.293118 | 1 |
GTATAGG | 1670 | 0.0 | 12.166185 | 1 |