Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005405370 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 15895791 |
Sequences flagged as poor quality | 0 |
Sequence length | 76 |
%GC | 49 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTATTAG | 2845 | 0.0 | 17.348469 | 1 |
GTATTAA | 4305 | 0.0 | 17.156694 | 1 |
GTTCTAG | 3890 | 0.0 | 16.017498 | 1 |
GTCCTAG | 3890 | 0.0 | 15.297611 | 1 |
GTGCTAG | 3495 | 0.0 | 14.722938 | 1 |
GTTCTAA | 4130 | 0.0 | 14.323888 | 1 |
GTACTAA | 2695 | 0.0 | 14.027791 | 1 |
GTCTTAG | 3045 | 0.0 | 14.024804 | 1 |
GTATATA | 4420 | 0.0 | 13.463282 | 1 |
TCTAGAC | 3385 | 0.0 | 13.443099 | 3 |
GTACTAG | 1825 | 0.0 | 13.426397 | 1 |
GTATTAT | 4265 | 0.0 | 13.295978 | 1 |
GGTCTAG | 2930 | 0.0 | 13.141634 | 1 |
GCTCTAG | 4470 | 0.0 | 13.077757 | 1 |
GTACTAT | 2780 | 0.0 | 12.969306 | 1 |
GTATAAG | 2890 | 0.0 | 12.839034 | 1 |
GGATTAG | 3165 | 0.0 | 12.718866 | 1 |
GTACAGA | 6975 | 0.0 | 12.696986 | 1 |
GTCTTAA | 3895 | 0.0 | 12.671731 | 1 |
GTACAGG | 7220 | 0.0 | 12.460062 | 1 |