Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005405486 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 7658386 |
Sequences flagged as poor quality | 0 |
Sequence length | 125 |
%GC | 48 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTACTAG | 980 | 0.0 | 18.822485 | 1 |
GTATAAG | 1850 | 0.0 | 18.333462 | 1 |
TATACAG | 2660 | 0.0 | 17.895157 | 5 |
TAGACCG | 510 | 2.910383E-11 | 17.500412 | 5 |
GTGTACG | 1020 | 0.0 | 16.917618 | 1 |
CTATACT | 1880 | 0.0 | 16.141336 | 4 |
GTATAGA | 2150 | 0.0 | 16.052065 | 1 |
TCTATAC | 2155 | 0.0 | 16.014297 | 3 |
GTCCTAG | 1835 | 0.0 | 15.889175 | 1 |
TAGACAG | 2710 | 0.0 | 15.80849 | 5 |
GTGCTAG | 1955 | 0.0 | 15.522612 | 1 |
TATACGG | 425 | 3.1224408E-7 | 15.400362 | 5 |
GTCCTAA | 2060 | 0.0 | 15.309112 | 1 |
GTATTAG | 1830 | 0.0 | 14.957124 | 1 |
CTAGACT | 2205 | 0.0 | 14.8416195 | 4 |
TAGGGTG | 1935 | 0.0 | 14.452538 | 5 |
CCTATAC | 1565 | 0.0 | 14.447625 | 3 |
GTATTAC | 1855 | 0.0 | 14.434773 | 1 |
GTGTAGG | 2560 | 0.0 | 14.410965 | 1 |
GTGTTAG | 2160 | 0.0 | 14.324879 | 1 |