FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005405498

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005405498
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24674270
Sequences flagged as poor quality0
Sequence length125
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTATATA165150.018.7726611
TATACTG116800.017.9826855
GTATTAT132950.017.1873761
GTATTAG76100.015.8736971
TTATACT150750.015.8274064
ATAATAC131200.015.7822193
GTATAAT127100.015.4970541
GTATTAA135400.015.4700131
ATTATAC123450.015.2306593
GTATAGG56500.015.0610171
GTATAGA83250.014.724811
CTATACT82850.014.7225844
TAATACT142400.014.7080594
TATACAG123450.014.5558825
GTATAAA176200.014.4883221
GTATTAC80000.014.2816341
TAATACA167350.013.4396754
TATATAC164150.013.37544253
GTATAAC61950.013.351811
GTCTTAT101850.013.3211141
Produced by FastQC (version 0.11.5)