FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005405810

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005405810
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4000000
Sequences flagged as poor quality0
Sequence length101
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTCTAG2400.0020079168.90605674-75
GATCGGA10150.08.42346392-93
ATCGGAA10800.07.476689394-95
AGATCGG11250.06.75540992-93
CCCGAGT11451.0344524E-46.23449561
CCCTATA9700.00419275465.88742071
TCGGAAG17150.05.816200794-95
CCATAGT14205.3829626E-55.6973931
CCACGGT11759.661752E-45.67029571
CCCTAAA19251.2100409E-65.43885561
CCTAAAC13850.00135818125.154151
Produced by FastQC (version 0.11.5)