FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005405812

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005405812
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4000000
Sequences flagged as poor quality0
Sequence length101
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGCTAA2900.004566661511.4653129
CCCTAGA15801.8005994E-76.32353261
CCCGGAA10803.2948115E-46.16739651
GATCGGA8901.7155708E-65.603867594-95
CCATAGG17104.883197E-65.5645681
CCCAAAT31755.456968E-125.39456371
CCTAACT13509.6919097E-45.28633981
CCCTAAT12100.0083985515.11158471
Produced by FastQC (version 0.11.5)