FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005405894

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005405894
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23216852
Sequences flagged as poor quality0
Sequence length100
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA122850.010.749886594
ATCGGAA118250.09.97574494
AGATCGG149100.09.48771494
TAGATCG49550.09.01057894
TCGGAAG143450.06.781761694
CGGAAGA164250.06.380756494
CAGATCG77000.05.55422494
AAGATCG71650.05.509894
Produced by FastQC (version 0.11.5)