FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005405898

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005405898
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23652843
Sequences flagged as poor quality0
Sequence length100
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA152550.010.69022194
ATCGGAA140550.010.63324394
AGATCGG182000.08.93458194
TCGGAAG165800.08.50366794
TAGATCG58050.07.44826494
CGGAAGA178450.07.137107494
AAGATCG81450.06.058535694
CAGATCG84300.05.686460594
GAGATCG103950.05.15406494
Produced by FastQC (version 0.11.5)