Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005405950 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 23416506 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 51 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GATCGGA | 14785 | 0.0 | 9.631555 | 94 |
ATCGGAA | 13550 | 0.0 | 9.434191 | 94 |
AGATCGG | 17440 | 0.0 | 9.027622 | 94 |
TAGATCG | 5800 | 0.0 | 8.508174 | 94 |
TCGGAAG | 15980 | 0.0 | 7.7054777 | 94 |
CGGAAGA | 17815 | 0.0 | 7.360265 | 94 |
CGTATGC | 1900 | 0.0 | 7.049585 | 46-47 |
CTCGTAT | 2275 | 0.0 | 5.990869 | 44-45 |
AAGATCG | 7390 | 0.0 | 5.7872467 | 94 |
TCGTATG | 1865 | 0.0 | 5.669907 | 46-47 |
TATGCCG | 2255 | 0.0 | 5.627163 | 48-49 |
CAGATCG | 8005 | 0.0 | 5.2839203 | 94 |