FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005406800

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005406800
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23664829
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA470650.09.0573794
ATCGGAA435800.08.89732894
AGATCGG524550.08.7449294
CGCGTAT6651.4551915E-118.48296144-45
TAGATCG163950.08.37074994
TCGCGTA5908.258212E-108.36589342-43
CGTCTGA128050.08.14828794
TCGGAAG429550.08.0092294
CGGAAGA416150.07.56689794
ACACGTC172850.07.47749694
CACACGT203300.07.236021594
TATGCCG22150.07.10850448-49
AAGATCG199550.06.806737494
CGTATGC23100.06.715095546-47
AATCGCG7953.720561E-86.50423940-41
GCACACG240650.06.444971694
ACGTCTG170650.06.444696494
GAGATCG289600.06.03722494
AGAGCAC379050.05.988851594
CAGATCG151900.05.940682494
Produced by FastQC (version 0.11.5)