FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005406801

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005406801
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24571144
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGT181500.09.55437394
TCGTGTA132050.09.46663694
GATCGGA504700.09.30217794
AGCGTCG206800.08.90815994
GTCGTGT155700.08.90401594
AGAGCGT276900.08.74050994
CGTCGTG170850.08.52705794
GAGCGTC259150.08.359920594
ATCGGAA463800.08.298614594
AGATCGG566000.08.02901994
TAGATCG182850.07.99314994
AAGAGCG310450.07.8716294
CGTGTAG135450.07.737101694
TCGGAAG463900.07.56743594
CGGAAGA441400.07.18660794
AAGATCG205500.06.974940394
CAGATCG154550.06.4464394
GAGATCG286800.05.99728194
GAAGAGC513750.05.890965594
GTAGGGA163450.05.405369394
Produced by FastQC (version 0.11.5)