FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005406804

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005406804
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26986484
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA589350.08.85217294
ATCGGAA543600.08.525063594
AGATCGG658500.08.4650494
TAGATCG195900.08.0852994
TCGGAAG536000.07.98828894
ACACGTC209150.07.95509794
CGTCTGA152650.07.728176694
CGGAAGA507350.07.624164694
CACACGT271700.07.47298794
ACGTCTG194050.06.806013694
GCACACG295650.06.39069894
CACGTCT222250.06.280797594
AGAGCAC456750.06.19466894
AAGATCG239150.06.033483594
AGCACAC401200.05.90431894
GAAGAGC602600.05.826283594
CAGATCG191600.05.691052494
GAGCACA468750.05.584882394
AAGAGCA573500.05.572827394
GAGATCG363600.05.467849794
Produced by FastQC (version 0.11.5)