FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005406821

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005406821
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21762195
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGT227650.010.61077694
AGCGTCG261800.09.54978794
GTCGTGT188600.09.36909994
TCGTGTA164550.08.96774994
ATCGGAA588150.08.96512794
AGAGCGT337300.08.80546894
AAGAGCG384450.08.74012994
CGTCGTG209050.08.56498294
TCGGAAG568200.08.45281494
GATCGGA638600.08.39669594
GAGCGTC312600.08.07303894
AGATCGG708950.08.0672794
CGTGTAG160500.07.934981394
TAGATCG225800.07.929626594
CGGAAGA530450.07.557119494
AAGATCG241150.07.36641694
GAAGAGC567350.06.77569694
GTGTAGG198650.06.742298694
TAGGGAA163600.06.63560394
CAGATCG192450.06.44670394
Produced by FastQC (version 0.11.5)