FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005406824

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005406824
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21958568
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGCGTA6300.010.07316842-43
ATCGGAA521900.09.15854494
CGCGTAT6500.09.04035244-45
GATCGGA569300.09.03168794
AGATCGG633200.08.84765394
ACACGTC190950.08.59010594
TAGATCG190400.08.39275994
TCGGAAG505950.08.3882894
CGTCTGA135950.08.193356594
AATCGCG8800.08.0127340-41
CGGAAGA483400.07.98232294
CACACGT231400.07.738456794
ACGTCTG171050.07.721043694
ATCGCGT10250.07.5671642-43
TATGCCG22450.07.432178548-49
GCACACG271050.07.143985394
CGTATGC23200.07.091410646-47
CACGTCT198200.07.09022994
AAGATCG232650.06.94941394
CAGATCG176700.06.86239894
Produced by FastQC (version 0.11.5)