Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005406852 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 31625159 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 48 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
ATCGGAA | 66870 | 0.0 | 8.96836 | 94 |
AGATCGG | 79910 | 0.0 | 8.598842 | 94 |
GATCGGA | 71545 | 0.0 | 8.507153 | 94 |
TCGGAAG | 65055 | 0.0 | 8.380521 | 94 |
TAGATCG | 25075 | 0.0 | 8.247179 | 94 |
ACACGTC | 24580 | 0.0 | 8.030843 | 94 |
CGGAAGA | 61395 | 0.0 | 7.9614844 | 94 |
CGTCTGA | 17655 | 0.0 | 7.7201185 | 94 |
GCACACG | 34435 | 0.0 | 7.67061 | 94 |
CACACGT | 29250 | 0.0 | 7.6324053 | 94 |
ACGTCTG | 22505 | 0.0 | 7.2676487 | 94 |
AAGATCG | 29560 | 0.0 | 6.7891774 | 94 |
CACGTCT | 25580 | 0.0 | 6.7614675 | 94 |
AGAGCAC | 54935 | 0.0 | 6.5278344 | 94 |
GAAGAGC | 71645 | 0.0 | 6.140216 | 94 |
GAGCACA | 55335 | 0.0 | 6.123914 | 94 |
CAGATCG | 22375 | 0.0 | 6.1125674 | 94 |
GAGATCG | 41290 | 0.0 | 5.975966 | 94 |
AGCACAC | 47880 | 0.0 | 5.801323 | 94 |
AAGAGCA | 69470 | 0.0 | 5.7438626 | 94 |