FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005406871

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005406871
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences36932406
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGT250050.09.20929194
CGTCGTG240950.09.08899794
AGCGTCG284050.09.0500294
ATCGGAA653900.08.8399794
GATCGGA705700.08.7105394
AGATCGG795250.08.6397494
GAGCGTC356600.08.47396594
GTCGTGT216550.08.31184894
TAGATCG246050.08.19390594
AGAGCGT381400.08.13242894
AAGAGCG435600.08.12389194
CGTGTAG193150.08.10226694
TCGTGTA187750.08.03492994
TCGGAAG645200.07.910290794
CGGAAGA615300.07.76003794
AAGATCG295950.06.748816594
CAGATCG243300.06.54808994
GAAGAGC715200.06.347556694
GAGATCG424250.05.26173294
Produced by FastQC (version 0.11.5)