FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005406874

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005406874
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28002321
Sequences flagged as poor quality0
Sequence length100
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTCTGA208150.09.21247594
ACACGTC287250.09.03174494
CACACGT347850.08.944550594
ATCGGAA855350.08.89601694
GATCGGA927800.08.702847594
CGGAAGA763500.08.56269894
GCACACG398850.08.48428994
TCGGAAG812300.08.22764894
AGATCGG1026700.08.13002694
ACGTCTG259350.07.81058594
CACGTCT290900.07.67436594
TAGATCG317950.07.65708694
AGAGCAC621650.07.590673494
AGCACAC530850.07.21569894
AAGATCG353250.07.17132194
CAGATCG262650.06.996678494
GAAGAGC811300.06.911169594
AAGAGCA774250.06.84731794
GAGCACA610850.06.693869694
AATCGCG11051.4551915E-116.381118340-41
Produced by FastQC (version 0.11.5)