FastQCFastQC Report
Fri 27 May 2022
EGAF00005406954

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005406954
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences94610780
Sequences flagged as poor quality0
Sequence length64-101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTCGACCCGTGCGGAGGAGCGAGGAGGAAGGACGCGCGAGGGCCGGGAC1945450.2056266738314598No Hit
GCTGCAGGTCGACCCGTGCGGAGGAGCGAGGAGGAAGGACGCGCGAGGGC1485750.15703813032722064No Hit
GCAGGTCGACCCGTGCGGAGGAGCGAGGAGGAAGGACGCGCGAGGGCCGG1114770.11782695375727797No Hit
CCGGGCCCGGCGCGCCGGGGGCCGCTACCGGCCTCACACCGTCCACGGGC1102710.11655225757572234No Hit
GTCGACCCGTGCGGAGGAGCGAGGAGGAAGGACGCGCGAGGGCCGGGACC1027490.10860178935212246No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)