FastQCFastQC Report
Sun 12 May 2024
EGAF00005407192

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005407192
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences82605990
Total Bases8.3 Gbp
Sequences flagged as poor quality0
Sequence length66-101
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGG916980.11100647785953535No Hit
GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGA856090.10363534169858625No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)