FastQCFastQC Report
Fri 27 May 2022
EGAF00005407280

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005407280
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences102480084
Sequences flagged as poor quality0
Sequence length65-101
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCGGGCCCGGCGCGCCGGGGGCCGCTACCGGCCTCACACCGTCCACGGGC2976060.2904037432287819No Hit
GTCTAACACGTGCGCGAGTCGGGGGCTCGCACGAAAGCCGCCGTGGCGCA1808360.17645965239450817No Hit
GGAGTCTAACACGTGCGCGAGTCGGGGGCTCGCACGAAAGCCGCCGTGGC1143450.11157777739526442No Hit
GCCGGCGGGAGCCCCGGGGAGAGTTCTCTTTTCTTTGTGAAGGGCAGGGC1140920.11133090015812243No Hit
CCCGGGCCCGGCGCGCCGGGGGCCGCTACCGGCCTCACACCGTCCACGGG1070920.10450030466407502No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)