FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005407420

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005407420
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19779607
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGGACCT69200.018.0645661
GACCTGG91500.017.947831
ACTGATG75550.017.6804521
ATAGACC61800.017.6176191
CGGAGCT62800.017.5778771
ATGCGAT62450.017.5311071
CCTCTGA70500.017.2309761
GAACCTA60850.017.213411
GGCGACT40850.017.2009581
CAGCCTT79400.017.095878
AAACCTG71900.017.0917591
GCGCGAT41050.017.043481
CCGGGAT53650.017.0431371
TACCTAT99650.016.9250761
CTGTGCT89300.016.888541
TGAGCCG57500.016.8838081
TCCGCGA44300.016.85500110
GAATGAA55850.016.8230481
TGGGCGT64750.016.7993951
CGTTGGG87800.016.798161
Produced by FastQC (version 0.11.5)