FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005407440

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005407440
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14785074
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGACTG58850.018.4059661
GACTAAC67650.018.2202031
CGACCTT63150.017.8080841
CCGTACT53450.017.7913341
CGTGAGC46950.017.6097681
TTAGGCA63500.017.5350551
GGATTAC52500.017.267221
ATGCGAT38650.017.2646311
ACTGATG37100.017.2240471
GGTATTG69650.017.2042181
TTGACGA44450.017.17905410
CGGACAC51300.017.1594941
GGCTCGA51800.017.1497691
AAACCTG42700.017.1401841
GGGACCT41300.017.0856881
TAAACCG45850.017.0634841
GGGAATG45350.016.9622341
ACCCACT44250.016.8591841
CGTCACT58700.016.8536241
TATTGAG35350.016.8526523
Produced by FastQC (version 0.11.5)