FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005407460

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005407460
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences30192635
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GACTAAC135950.018.0606691
CGGACTG123000.018.0092681
GGCTCGA108100.017.6930481
GGTATTG138000.017.4427931
CCGTACT114850.017.3182641
CGTGAGC100800.017.289331
GGGACCT87100.017.2855511
CGACCTT128250.017.2798841
ACCCACT94500.017.2295041
TTAGGCA123350.017.1596641
TTTACTG117300.017.1022051
GGATTAC106750.017.0600341
CAATGAA83250.017.050838
AGCTTGA119600.017.025421
TTGACGA94900.017.02223810
AAACCTG88800.017.0112251
TTTATGC115350.017.0079421
GGGAATG92800.016.9927831
CACCCAT92900.016.9367688
GCGCAAC151200.016.930381
Produced by FastQC (version 0.11.5)