FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005407470

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005407470
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences49592431
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATGCGAT167800.018.0745431
ACTGATG167450.017.5812051
GACTAAC130100.017.159781
GCGCGAT115100.017.007781
GATGCTA149550.016.9756571
CAATGGA172700.016.945258
TGACAAC174300.016.9308511
CCGGGAT108250.016.8609941
AGTGAGG199450.016.7568931
ATAACGC144400.016.6432441
ACTGAAC131050.016.5881021
CTGATCC183300.016.5682011
AGACGTT176350.016.5563811
CGCTATC149650.016.4848271
TGAGCCG141200.016.483621
GAACCTA149000.016.4685651
TGGTTAG183950.016.405271
GATGAAA134650.016.3697721
ATTGGTG200450.016.3556611
GCCTCTA157350.016.352531
Produced by FastQC (version 0.11.5)