FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005407522

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005407522
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences30895869
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGACTG124100.018.1620161
GACTAAC137550.018.0908281
GGCTCGA108050.017.6420021
CCGTACT116950.017.595781
CGTGAGC104450.017.44691
CGACCTT132800.017.4364471
GGTATTG148000.017.387121
TTAGGCA123950.017.3604151
GGATTAC112900.017.34071
ATGCGAT84200.017.2854771
CAATGAA87100.017.2225138
TTGACGA94200.017.2187510
CGGACAC104550.017.1885261
GGGAATG93850.017.155861
ACTGATG78100.017.1473031
TTTACTG115150.017.098421
TAAACCG100450.017.095211
TATTGAG76900.017.0595073
AGCTTGA121500.017.0533051
GGGACCT86350.017.0306661
Produced by FastQC (version 0.11.5)