FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005407528

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005407528
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34142354
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GACTAAC111800.018.1445391
GGGAATG120100.017.6812821
ATCGAGT135850.017.6615181
CTGAAGT105400.017.5114461
GGCGACT120400.017.4945851
CGACCTT147150.017.3968411
CCAGCGA141100.017.3911
CTGATCC124100.017.3555951
CCACTAC142350.017.3021581
ATTGGAC125900.017.2920151
ACTGATG94450.017.2633721
GCGCGAT83050.017.2488691
GATCGCG123550.017.1875511
ATAGACC80550.017.094421
ACCCACT121050.017.0918541
TACACGA87600.016.9987661
ACTGAAC90600.016.993421
ACGAGCC94250.016.9784431
TGACGGC90900.016.881771
AGCTCGC111300.016.8377639
Produced by FastQC (version 0.11.5)