FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005407572

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005407572
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19487862
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGGACCT74600.018.05811
GACCTGG92050.018.0331551
ATAGACC64950.017.9911541
ACTGATG77300.017.9625721
CGGAGCT61250.017.6940731
ATGCGAT60450.017.5276051
AAACCTG67050.017.4878711
CCTCTGA67150.017.44681
CAGCCTT85350.017.2967788
TACCTAT94300.017.2925591
TGGGCGT62550.017.132741
CGTTGGG78850.017.1103671
GAACCTA60150.017.0781861
TGCCCTA66250.016.9983941
TGAGCCG54850.016.9806651
CTGTGCT84000.016.9022461
ACTGAAC49000.016.8662071
TCCGCGA48650.016.80582410
CCGGGAT50850.016.7685451
CGGACGT53350.016.7582591
Produced by FastQC (version 0.11.5)