FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005407602

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005407602
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences30331117
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAAGAC119150.018.272851
GGGACCT108100.018.2457711
TTAGGCA157750.018.1793481
GCGCGAT103750.018.0431291
CTTAGGA114400.017.7373751
CTGCGGA153100.017.7313371
GGGAGAT81200.017.57141
ATAGACC145400.017.449831
TACGGAT99250.017.3286061
CTACCCA90350.017.228541
TACACGA96550.017.2145211
GCCGACA96550.017.1184713
TGACTAG95550.017.1081331
TATGCCC98950.017.042951
ATCGAGT87000.016.9944291
CGACCTT103900.016.9629941
AGCCTAA138050.016.961171
GGTATTG117000.016.935851
CCGCTAG90050.016.92179510
TGCGGAC67650.016.9129522
Produced by FastQC (version 0.11.5)