FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005407624

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005407624
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29025080
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGACTG117750.018.0623931
GACTAAC128350.018.0584981
CCGTACT106000.017.7006871
GGCTCGA100750.017.69041
TTAGGCA119750.017.4991661
GGTATTG138700.017.424841
GGGAATG91850.017.402491
CGACCTT121550.017.3647121
CGTGAGC93650.017.3485181
GGGACCT79750.017.3189641
TTTATGC105500.017.2482621
CAATGAA83450.017.2466588
TTGACGA92050.017.18802310
GGATTAC105550.017.115651
TAAACCG93800.017.1053411
TTAACTC98800.017.047581
CGGACAC105300.017.0411421
AGCTTGA115250.017.016441
TATTGAG70150.017.0124323
TTTACTG112200.017.010741
Produced by FastQC (version 0.11.5)