FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005407628

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005407628
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17882816
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GACTAAC61800.018.0252591
GCGCGAT44950.017.7624651
ATCGAGT71400.017.7478121
CTGATCC63700.017.740831
CCACTAC73150.017.6401941
GGCGACT66800.017.4004541
CTGAAGT56150.017.3793431
GGGAATG62800.017.369021
CGACCTT78950.017.365791
TGACGGC48000.017.2218721
ATTGGAC62300.017.1686081
CCAGCGA74850.017.1183321
ATAACGC61050.017.1073151
GCGAGAA42050.017.0695361
GATCGCG67350.017.063771
ACGAGCC53850.017.0545561
CCACTAG67650.017.0362133
ACTGAAC45950.016.9371191
AGCTCGC58100.016.9291119
ACTGATG47650.016.9040831
Produced by FastQC (version 0.11.5)