FastQCFastQC Report
Fri 1 Jul 2022
EGAF00005407634

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005407634
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37125036
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCAGTCACCACCAGGTAGGCATAATTTCTTATATGGGGGTGCTGAGAG429680.1157386083073428No Hit
CATCAAGCACACCGACTTTTGCTGATTTTCTTATATGGGGATCCTGAGGA402660.10846050088678702No Hit
AACTGGTTCGTGGACCAAAGCCCGCCTTTCTTATATGGGGCTTCCAGCCT389870.10501538638238628No Hit
TGCGGGTAGTGTACCTACGCCGCCAGTTTCTTATATGGGGCACTTCACAG376460.10140326867292467No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)