FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005407666

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005407666
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13074287
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCACCTA79850.017.8712121
GGGACCT53650.017.8515511
ACTGATG44300.017.8376461
CGGACTG39150.017.6063141
TGGACGC40700.017.60531
CCACTAC41200.017.514121
GGGCATC47150.017.3801611
GATGCTA49900.017.3728921
TACTTGT52850.017.3579481
TGCGCAG62450.017.3075871
CTAAGAC46150.017.2975371
TGAGCAT53100.017.295231
GTAACTG56500.017.1654191
GAAACTC58750.017.1607841
TACTTAC63350.017.0935631
TCTGGAA47200.017.0837941
ATGCGAT33150.017.0788571
CCGGTAG52100.017.0073381
TGCGGGT41250.017.003581
CGGAGTC56100.016.9460141
Produced by FastQC (version 0.11.5)