FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005407676

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005407676
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35623994
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTTTAAGTTTCAGCTTTGCAACCAT739670.20763252991789746No Hit
TGCCCTCCAATGGATCCTCGTTAAAG689210.19346791940286087No Hit
CGTTCGTTATCGGAATTAACCAGACA632810.177635893381298No Hit
ACCTTTAAGTTTCAGCTTTGCAACCA357740.10042108136443094No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)