FastQCFastQC Report
Thu 16 Jun 2022
EGAF00005407753

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005407753
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35838951
Sequences flagged as poor quality0
Sequence length151
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGGCAT503600.14051750566025217No Hit
GTCCGCACTAAGTTCGGCATCAATATGGTGACCTCCCGGGAGCGGGGGAC391100.10912707796609337No Hit
CGGGTGTCCGCACTAAGTTCGGCATCAATATGGTGACCTCCCGGGAGCGG379240.10581782932206915No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)