FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005408307

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005408307
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17221038
Sequences flagged as poor quality0
Sequence length151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCCGCACTAAGTTCGGCATCAATATGGTGACCTCCCGGGAGCGGGGGAC253920.1474475580391844No Hit
CGGGTGTCCGCACTAAGTTCGGCATCAATATGGTGACCTCCCGGGAGCGG233440.13555512739708256No Hit
GGGAGATACCATGATCACGAAGGTGGTTTTCCCAGGGCGAGGCTTATCCA226620.13159485508364827No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)