FastQCFastQC Report
Fri 1 Jul 2022
EGAF00005408326

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005408326
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences33893863
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGT524000.15460025904984628No Hit
CTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACG435800.12857784903420422No Hit
CTCGCTATGTTGCTCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATC431830.12740654554483802No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)